Differences

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--- manual:python_tools [2016/08/30 18:20] – created zenke
+++ manual:python_tools [2016/08/30 18:50] (current) – [Auryn Python tools] zenke
@@ Line 3: / Line 3: @@
 Auryn v0.8.0 is the first version to come with a set of Python tools which allow decoding from binary files generated with [[BinarySpikeMonitor]] or [[BinaryStateMonitor]]. You can find the Python code in the ''tools/python'' directory.
-To use the Auryn tools point your Python path to the ''auryn/tools/python'' directory. For instance by
+To use the Auryn Python tools, point your Python path to the ''auryn/tools/python'' directory. For instance by
 <code>
 export PYTHONPATH=$PYTHONPATH:<path_to_auryn_src_directory>/tools/python
@@ Line 60: / Line 60: @@
 The output should look similar to the plot above.
+===== Example: Vogels plot (overview spiking statistics) =====
+<code python>
+import numpy as np
+import pylab as pl
+from auryntools import *
+from auryntools.stats import *
+filename  =  "/tmp/coba.0.e.spk"
+sf = AurynBinarySpikeFile(filename)
+spikes = sf.get_spikes()
+vogels_plot(spikes)
+</code>
+Gives the following output on the above spiking data from the Vogels Abbott benchmark.
+{{ :manual:auryn_python_vp.png |}}
 ===== Example: Compute a neurons receptive field via reverse correlations =====